Stem-loop dvi-mir-957

Accession

MI0029253

Description

Drosophila virilis dvi-mir-957 precursor miRNA

Sequence

109536 reads, 945.0 reads per million, 38 experiments

uagauaaugcccacaaugguuCUUAGUUUUAGACGUGUUUUGGUgugcuugaaguuuuguuccgauUGAAACCGUCCAAAACUGAGGCcgauugugagguaaaagcguccaaa
.......(((((((((((((.(((((((((.((((.((((((((..((..........))....)))))))))))).)))))))))))).)))))).))))............

Structure

-----uagauaa    -      -   u         A    U        --gu  uuga 
            ugcc cacaau ggu CUUAGUUUU GACG GUUUUGGU    gc    a
            |||| |||||| ||| ||||||||| |||| ||||||||    ||     
            augg guguua cCG GAGUCAAAA CUGC CAAAGUua    ug    g
aaaccugcgaaa    a      g   -         C    -        gccu  uuuu 

Annotation confidence High

Genome context

scaffold_13049: 17242412-17242524 [+]

Mature dvi-miR-957-5p

• Accession: MIMAT0053505
• Description: Drosophila virilis dvi-miR-957-5p mature miRNA
• Sequence: 22 - CUUAGUUUUAGACGUGUUUUGGU - 44
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-957-3p

• Accession: MIMAT0035578
• Description: Drosophila virilis dvi-miR-957-3p mature miRNA
• Sequence: 67 - UGAAACCGUCCAAAACUGAGGC - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372