miRBase entry: dvi-mir-963

Stem-loop dvi-mir-963

Accession

MI0029256

Description

Drosophila virilis dvi-mir-963 precursor miRNA

Sequence

gaugggcauaaacaacaaucuaaucugaAACAAGGUACAUAUCAGAGUGUUUCuuaaauuugauuauugaaaccucuguauauaccuuucauuggauuaaacugauaagcacauguuucaaa
.(((.((.........(((((((..((((...(((((.(((.(((((.(((((...............))))))))))))).))))))))))))))))..........)).)))........

Structure

-------g   g  -auaaacaac       uc    ACA     C   U     U     uuaaau 
        aug gc          aaucuaa  ugaA   AGGUA AUA CAGAG GUUUC      u
        ||| ||          |||||||  ||||   ||||| ||| ||||| |||||      u
        uac cg          uuagguu  acuu   uccau uau gucuc caaag      g
aaacuuug   a  aauagucaaa       --    ---     a   -     -     uuauua

Annotation confidence Not enough data

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Genome context

scaffold_12963: 3616341-3616462 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dvi-mir-963

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-963-5p

Accession	MIMAT0035582
Description	Drosophila virilis dvi-miR-963-5p mature miRNA
Sequence	29 - AACAAGGUACAUAUCAGAGUGUUUC - 53
Evidence	experimental Illumina [1]

References

PubMed ID: 24448446
Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
"Ninova M, Ronshaugen M, Griffiths-Jones S"
"RNA (2014) 20:360-372