Stem-loop dvi-mir-965

Accession

MI0029258

Description

Drosophila virilis dvi-mir-965 precursor miRNA

Sequence

29613 reads, 346.0 reads per million, 38 experiments

aaaaacacacacacaaauguuuagGGGGUCAAACUGUACGUUGUAUGUGcaaaugaugaaauucaUAAGCGUAUAGCUUUUCCCCUUaaacguugaugugacgacaa
.........((((..(((((((((((((..((.(((((((((.((((................))))))))))))).))..)))))))))))))..)))).......

Structure

aaaaacaca    ca             UC  A         G    UGcaaau 
         caca  aauguuuagGGGG  AA CUGUACGUU UAUG       g
         ||||  |||||||||||||  || ||||||||| ||||        
         gugu  uugcaaaUUCCCC  UU GAUAUGCGA AUac       a
--aacagca    ag             UU  C         -    uuaaagu 

Annotation confidence High

Genome context

scaffold_12963: 8856406-8856512 [+]

Mature dvi-miR-965-5p

• Accession: MIMAT0035584
• Description: Drosophila virilis dvi-miR-965-5p mature miRNA
• Sequence: 25 - GGGGUCAAACUGUACGUUGUAUGUG - 49
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-965-3p

• Accession: MIMAT0035585
• Description: Drosophila virilis dvi-miR-965-3p mature miRNA
• Sequence: 66 - UAAGCGUAUAGCUUUUCCCCUU - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372