miRBase entry: dvi-mir-968

Stem-loop dvi-mir-968

Accession

MI0029259

Description

Drosophila virilis dvi-mir-968 precursor miRNA

Sequence

uuuuaauuucaauuauacaugugccuUAAGUAGUAACCAUUAAGAGGUUGuuguuagauuuaaauccACCUUUUAAUGUACUACUUAUGacaaaugcauagcaaaucagcaaaucga
.............(((.(((.((.(.(((((((((..(((((((((((.(((..........)))..)))))))))))))))))))).).)).))).)))((......)).......

Structure

----uuuuaauuucaau   a   g  c u         AC           -U   guua 
                 uau cau ug c UAAGUAGUA  CAUUAAGAGGU  Guu    g
                 ||| ||| || | |||||||||  |||||||||||  |||     
                 aua gua ac G AUUCAUCAU  GUAAUUUUCCA  uaa    a
agcuaaacgacuaaacg   c   a  a U         --           cc   auuu

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scaffold_12723: 5044024-5044140 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dvi-mir-968

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-968-5p

Accession	MIMAT0035586
Description	Drosophila virilis dvi-miR-968-5p mature miRNA
Sequence	27 - UAAGUAGUAACCAUUAAGAGGUUG - 50
Evidence	experimental Illumina [1]

Mature dvi-miR-968-3p

Accession	MIMAT0035587
Description	Drosophila virilis dvi-miR-968-3p mature miRNA
Sequence	68 - ACCUUUUAAUGUACUACUUAUG - 89
Evidence	experimental Illumina [1]

References

PubMed ID: 24448446
Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
"Ninova M, Ronshaugen M, Griffiths-Jones S"
"RNA (2014) 20:360-372