Stem-loop dvi-mir-980

Accession

MI0029265

Description

Drosophila virilis dvi-mir-980 precursor miRNA

Sequence

gaccaaaugugagagcgcauugcaugugAGUCCCUCAUUUGGCAGGUUUAGCugcuuuuaauacgauauugcUAGCUGCCUUGUGAAGGGCUUacgugugauuguuaaacaacu
.......(((...((((.(((((((((((((((.((((..(((((..(((((..................))))))))))..)))).)))))))))))))))))))..)))...

Structure

gaccaaa   gag    c               C    UU     GU     ugcuuuua 
       ugu   agcg auugcaugugAGUCC UCAU  GGCAG  UUAGC        a
       |||   |||| ||||||||||||||| ||||  |||||  |||||         
       aca   uugu uagugugcaUUCGGG AGUG  CCGUC  GAUcg        u
----uca   -aa    -               A    UU     --     uuauagca 

Annotation confidence Low

Genome context

scaffold_10277: 1020-1133 [-]

Mature dvi-miR-980-5p

• Accession: MIMAT0035595
• Description: Drosophila virilis dvi-miR-980-5p mature miRNA
• Sequence: 29 - AGUCCCUCAUUUGGCAGGUUUAGC - 52
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-980-3p

• Accession: MIMAT0035596
• Description: Drosophila virilis dvi-miR-980-3p mature miRNA
• Sequence: 73 - UAGCUGCCUUGUGAAGGGCUU - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372