Stem-loop dvi-mir-987

Accession

MI0029267

Description

Drosophila virilis dvi-mir-987 precursor miRNA

Sequence

97741 reads, 363.0 reads per million, 35 experiments

gcucacaaauguugaacugugcuUAAAGUAAAUAGUCUGGAUUGAUGaaaguuuuauucaagaauucAUCAACAGGCAUUUACUUCAACugcaguuuaaacgaaaugcaacag
((.........((((((((((.((.((((((((.(((((..(((((((..(((((.....))))))))))))))))))))))))).)).)))))))))).......)).....

Structure

-----  ucacaaaug          c  A        A     GA       aa     a 
     gc         uugaacugug uU AAGUAAAU GUCUG  UUGAUGa  guuuu u
     ||         |||||||||| || |||||||| |||||  |||||||  ||||| u
     cg         aauuugacgu AA UUCAUUUA CGGAC  AACUAcu  uaaga c
gacaa  --uaaagca          C  C        -     --       --     a 

Annotation confidence High

Genome context

scaffold_12875: 1241657-1241769 [-]

Mature dvi-miR-987-5p

• Accession: MIMAT0035599
• Description: Drosophila virilis dvi-miR-987-5p mature miRNA
• Sequence: 24 - UAAAGUAAAUAGUCUGGAUUGAUG - 47
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-987-3p

• Accession: MIMAT0053507
• Description: Drosophila virilis dvi-miR-987-3p mature miRNA
• Sequence: 68 - AUCAACAGGCAUUUACUUCAAC - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372