Stem-loop dvi-mir-994

Accession

MI0029271

Description

Drosophila virilis dvi-mir-994 precursor miRNA

Sequence

uuugauuuauaucgaguuaucUAAGGAAAUAGUAGCCGUGAUUuuacauuagaagcuuucacauauCACAGUUGCUGUUUCUUUUAGAUagcucuuuuguaagcagc
.(((.((((((..(((((((((((((((((((((((.(((((......................))))).))))))))))).))))))))))))...))))))))).

Structure

u   a      -uc            -           C     Uuuacauuag 
 uug uuuaua   gaguuaucUAAG GAAAUAGUAGC GUGAU          a
 ||| ||||||   |||||||||||| ||||||||||| |||||           
 gac gaaugu   cucgaUAGAUUU CUUUGUCGUUG CACua          a
c   -      uuu            U           A     uacacuuucg 

Annotation confidence Low

Genome context

scaffold_13047: 1194168-1194274 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dvi-mir-994

Mature dvi-miR-994-5p

• Accession: MIMAT0035606
• Description: Drosophila virilis dvi-miR-994-5p mature miRNA
• Sequence: 22 - UAAGGAAAUAGUAGCCGUGAUU - 43
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-994-3p

• Accession: MIMAT0035607
• Description: Drosophila virilis dvi-miR-994-3p mature miRNA
• Sequence: 67 - CACAGUUGCUGUUUCUUUUAGAU - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372