miRBase entry: dvi-mir-994

Stem-loop dvi-mir-994

Accession

MI0029271

Description

Drosophila virilis dvi-mir-994 precursor miRNA

Sequence

uuugauuuauaucgaguuaucUAAGGAAAUAGUAGCCGUGAUUuuacauuagaagcuuucacauauCACAGUUGCUGUUUCUUUUAGAUagcucuuuuguaagcagc
.(((.((((((..(((((((((((((((((((((((.(((((......................))))).))))))))))).))))))))))))...))))))))).

Structure

u   a      -uc            -           C     Uuuacauuag 
 uug uuuaua   gaguuaucUAAG GAAAUAGUAGC GUGAU          a
 ||| ||||||   |||||||||||| ||||||||||| |||||           
 gac gaaugu   cucgaUAGAUUU CUUUGUCGUUG CACua          a
c   -      uuu            U           A     uacacuuucg

Annotation confidence Not enough data

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Genome context

scaffold_13047: 1194168-1194274 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from dvi-mir-994

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dvi-miR-994-5p

Accession	MIMAT0035606
Description	Drosophila virilis dvi-miR-994-5p mature miRNA
Sequence	22 - UAAGGAAAUAGUAGCCGUGAUU - 43
Evidence	experimental Illumina [1]

Mature dvi-miR-994-3p

Accession	MIMAT0035607
Description	Drosophila virilis dvi-miR-994-3p mature miRNA
Sequence	67 - CACAGUUGCUGUUUCUUUUAGAU - 89
Evidence	experimental Illumina [1]

References

PubMed ID: 24448446
Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
"Ninova M, Ronshaugen M, Griffiths-Jones S"
"RNA (2014) 20:360-372