Stem-loop dvi-mir-iab-8

Accession

MI0029276

Description

Drosophila virilis dvi-mir-iab-8 precursor miRNA

Sequence

1055 reads, 7.0 reads per million, 22 experiments

cgucgcugguguuuccucgugUUACGUAUACUGAAGGUAUACcggauaggauacacuCAGGAUACAUUCAGUAUACGUauacgaaguugcacaggcucua
....(((.((((..(.((((((.((((((((((((.((((.((.((..(....)..)).)))))).)))))))))))))))))).)..)))).)))....

Structure

cguc   g    uu c      U            G    A  g  ua g 
    gcu gugu  c ucgugU ACGUAUACUGAA GUAU Cc ga  g a
    ||| ||||  | |||||| |||||||||||| |||| || ||  |  
    cgg cacg  g agcaua UGCAUAUGACUU CAUA GG Cu  c u
aucu   a    uu a      -            A    -  A  ca a 

Annotation confidence Medium

Genome context

scaffold_12855: 414690-414789 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dvi-mir-iab-8

Mature dvi-miR-iab-8-5p

• Accession: MIMAT0035616
• Description: Drosophila virilis dvi-miR-iab-8-5p mature miRNA
• Sequence: 22 - UUACGUAUACUGAAGGUAUAC - 42
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-iab-8-3p

• Accession: MIMAT0035617
• Description: Drosophila virilis dvi-miR-iab-8-3p mature miRNA
• Sequence: 58 - CAGGAUACAUUCAGUAUACGU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372