Stem-loop dvi-mir-9548

Accession

MI0029287

Description

Drosophila virilis dvi-mir-9548 precursor miRNA

Sequence

aacucaaauuucuucuaaauguuaUAAGCAAAUAUGCGUGGCACGGCUugugcuuuagcuaaacagCUGUGACUACUAUUUGCUUAGccaacagaagaaguuuucgac
.....(((((((((((...((...((((((((((...(((((((((((.((((....))...))))))))).))))))))))))))..))..))))))))))).....

Structure

aacuc           aaa  uua          UGC    -       u  ---  u 
     aaauuucuucu   ug   UAAGCAAAUA   GUGG CACGGCU gu   gc u
     |||||||||||   ||   ||||||||||   |||| ||||||| ||   ||  
     uuugaagaaga   ac   AUUCGUUUAU   CAUC GUGUCga ca   cg u
cagcu           -ca  -cG          ---    A       -  aau  a 

Annotation confidence Low

Genome context

scaffold_13047: 10963007-10963114 [+]

Mature dvi-miR-9548-5p

• Accession: MIMAT0035638
• Description: Drosophila virilis dvi-miR-9548-5p mature miRNA
• Sequence: 25 - UAAGCAAAUAUGCGUGGCACGGCU - 48
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9548-3p

• Accession: MIMAT0035639
• Description: Drosophila virilis dvi-miR-9548-3p mature miRNA
• Sequence: 67 - CUGUGACUACUAUUUGCUUAG - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372