Stem-loop dvi-mir-9550

Accession

MI0029288

Description

Drosophila virilis dvi-mir-9550 precursor miRNA

Sequence

1375 reads, 17.0 reads per million, 37 experiments

acaaugcuucagauguUUCAUGUUCAGACACUUGGCGCagcacuuuaagggggcuCUAGGUACUACAAACGUGGAGCacacugaagucacau
.....(((((((.(((((((((((.((..((((((.((..(........)..)).)))))).))...)))))))))))..))))))).....

Structure

acaau       -a           --C  AC      C  ag acu 
     gcuucag  uguUUCAUGUU   AG  ACUUGG GC  c   u
     |||||||  |||||||||||   ||  |||||| ||  |    
     ugaaguc  aCGAGGUGCAA   UC  UGGAUC cg  g   u
uacac       ac           ACA  -A      u  gg gaa 

Annotation confidence High

Genome context

scaffold_13049: 24646575-24646666 [-]

Mature dvi-miR-9550-5p

• Accession: MIMAT0035640
• Description: Drosophila virilis dvi-miR-9550-5p mature miRNA
• Sequence: 17 - UUCAUGUUCAGACACUUGGCGC - 38
• Evidence: experimental ; Illumina [1]

Mature dvi-miR-9550-3p

• Accession: MIMAT0035641
• Description: Drosophila virilis dvi-miR-9550-3p mature miRNA
• Sequence: 56 - CUAGGUACUACAAACGUGGAGC - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24448446
   Fast-evolving microRNAs are highly expressed in the early embryo of Drosophila virilis
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "RNA (2014) 20:360-372