Stem-loop bra-MIR9559

Accession

MI0029305

Description

Brassica rapa bra-MIR9559 precursor miRNA

Literature search

1 open access papers mention bra-MIR9559
(1 sentences)

Sequence

gaaucuuucugucauuaggUUUGGAUUUUGGUCAUUGUUGggaaagguucuugaacaaugaacuaaauccaACAAUGAACGAAAUCCAAAUCuaauuacaaaaagauug
.(((((((.(((.(((((((((((((((((.(((((((((((...(((((.........)))))...))))))))))).))))))))))))))))).))).))))))).

Structure

g       c   c                 G           aaa     uug 
 aaucuuu ugu auuaggUUUGGAUUUUG UCAUUGUUGgg   gguuc   a
 ||||||| ||| ||||||||||||||||| |||||||||||   |||||   a
 uuagaaa aca uaauCUAAACCUAAAGC AGUAACAaccu   ucaag   c
g       a   u                 A           aaa     uaa 

Annotation confidence Not enough data

Genome context

chrA4: 346426-346534 [+]

Mature bra-miR9559-5p

• Accession: MIMAT0035671
• Description: Brassica rapa bra-miR9559-5p mature miRNA
• Sequence: 20 - UUUGGAUUUUGGUCAUUGUUG - 40
• Evidence: experimental ; Illumina [1]

Mature bra-miR9559-3p

• Accession: MIMAT0035672
• Description: Brassica rapa bra-miR9559-3p mature miRNA
• Sequence: 72 - ACAAUGAACGAAAUCCAAAUC - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24559317
   Identification of novel and conserved miRNAs involved in pollen development in Brassica campestris ssp. chinensis by high-throughput sequencing and degradome analysis
   Jiang J, Lv M, Liang Y, Ma Z, Cao J
   BMC Genomics (2014) 15:146