miRBase entry: mse-mir-9571a

Stem-loop mse-mir-9571a

Accession

MI0029324

Description

Manduca sexta mse-mir-9571a precursor miRNA

Sequence

ucaaugacauuacaccugcgcgcagggguugcaagaccagaccacuuauuuucuuauuauugaaccaaAUAAGUUUCUGGAAUUGUAGCuucugcguugcuau
.................(((((((((((((((((..(((((..((((((((((........))...)))))))).)))))..)))))))))))))).)))...

Structure

ucaaugacauuacaccu   -              ga     cc        ---  uua 
                 gcg cgcagggguugcaa  ccaga  acuuauuu   uc   u
                 ||| ||||||||||||||  |||||  ||||||||   ||    
                 cgu gcgucuuCGAUGUU  GGUCU  UGAAUAaa   ag   u
--------------uau   u              AA     -U        cca  uua

Annotation confidence Not enough data

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Genome context

JH668323.1: 676991-677093 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mse-mir-9571a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mse-miR-9571a

Accession	MIMAT0035707
Description	Manduca sexta mse-miR-9571a mature miRNA
Sequence	69 - AUAAGUUUCUGGAAUUGUAGC - 89
Evidence	experimental Illumina [1]

References

PubMed ID: 24508515
Identification of conserved and novel microRNAs in Manduca sexta and their possible roles in the expression regulation of immunity-related genes
"Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
"Insect Biochem Mol Biol (2014) 47:12-22