miRBase entry: mse-mir-9571b

Stem-loop mse-mir-9571b

Accession

MI0029325

Description

Manduca sexta mse-mir-9571b precursor miRNA

Sequence

uccaugacauuauaccugcgcgcagggguugcaagaccaggccacuuauuuuuuauuauugaacaaAAUAAGUUCCUGGAAUUGUAGCuucugcguugcua
.................(((((((((((((((((..(((((..((((((((((((....)))..))))))))).)))))..)))))))))))))).)))..

Structure

uccaugacauuauaccu   -              ga     cc         --   u 
                 gcg cgcagggguugcaa  ccagg  acuuauuuu  uua u
                 ||| ||||||||||||||  |||||  |||||||||  |||  
                 cgu gcgucuuCGAUGUU  GGUCC  UGAAUAAaa  agu a
---------------au   u              AA     -U         ca   u

Annotation confidence Not enough data

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Genome context

JH668323.1: 670401-670501 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mse-mir-9571b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature mse-miR-9571b

Accession	MIMAT0035708
Description	Manduca sexta mse-miR-9571b mature miRNA
Sequence	67 - AAUAAGUUCCUGGAAUUGUAGC - 88
Evidence	experimental Illumina [1]

References

PubMed ID: 24508515
Identification of conserved and novel microRNAs in Manduca sexta and their possible roles in the expression regulation of immunity-related genes
"Zhang X, Zheng Y, Jagadeeswaran G, Ren R, Sunkar R, Jiang H"
"Insect Biochem Mol Biol (2014) 47:12-22