Stem-loop gga-mir-9-3

Accession

MI0029331

Description

Gallus gallus gga-mir-9-3 precursor miRNA

Literature search

23 open access papers mention gga-mir-9-3
(347 sentences)

Sequence

30082963 reads, 13364.0 reads per million, 236 experiments

agggauguuucugUCUUUGGUUAUCUAGCUGUAUGAguguuguggagccaucAUAAAGCUAGAUAACCGAAAGUAgaaaugacuuc
.(((..(((((((.((((((((((((((((.(((((..(((....)))..))))).)))))))))))).)))))))))))..))).

Structure

a   au       U    -            G     gu   g 
 ggg  guuucug CUUU GGUUAUCUAGCU UAUGA  guu u
 |||  ||||||| |||| |||||||||||| |||||  |||  
 uuc  uaaagAU GAAA CCAAUAGAUCGA AUAcu  cga g
c   ag       -    G            A     ac   g 

Annotation confidence High

Genome context

10: 12947206-12947291 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-9-3

Mature gga-miR-9-5p

• Accession: MIMAT0001195
• Description: Gallus gallus gga-miR-9-5p mature miRNA
• Sequence: 14 - UCUUUGGUUAUCUAGCUGUAUGA - 36
• Evidence: not_experimental

Mature gga-miR-9-3-3p

• Accession: MIMAT0061075
• Description: Gallus gallus gga-miR-9-3-3p mature miRNA
• Sequence: 53 - AUAAAGCUAGAUAACCGAAAGUA - 75
• Evidence: not_experimental

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196