Stem-loop gga-mir-9-3

Accession

MI0029331

Description

Gallus gallus gga-mir-9-3 precursor miRNA

Literature search

19 open access papers mention gga-mir-9-3
(351 sentences)

Sequence

5211438 reads, 54589 reads per million, 5 experiments

agggauguuucugUCUUUGGUUAUCUAGCUGUAUGAguguuguggagccaucauaaagcuagauaaccgaaaguagaaaugacuuc
.(((..(((((((.((((((((((((((((.(((((..(((....)))..))))).)))))))))))).)))))))))))..))).

Structure

a   au       U    -            G     gu   g 
 ggg  guuucug CUUU GGUUAUCUAGCU UAUGA  guu u
 |||  ||||||| |||| |||||||||||| |||||  |||  
 uuc  uaaagau gaaa ccaauagaucga auacu  cga g
c   ag       -    g            a     ac   g 

Annotation confidence Medium

Genome context

chr10: 12934122-12934207 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gga-mir-9-3

Mature gga-miR-9-5p

• Accession: MIMAT0001195
• Description: Gallus gallus gga-miR-9-5p mature miRNA
• Sequence: 14 - UCUUUGGUUAUCUAGCUGUAUGA - 36
• Evidence: not_experimental

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196