Stem-loop gga-mir-92-2

Accession

MI0029335

Description

Gallus gallus gga-mir-92-2 precursor miRNA

Literature search

17 open access papers mention gga-mir-92-2
(40 sentences)

Sequence

69406 reads, 1211 reads per million, 5 experiments

guuccuccguggguggggauuuguugcauuacuuguagcuguguguagagUAUUGCACUUGUCCCGGCCUGuggaggaaag
.(((((((((((((.(((((..((.(((.(((((...((...))...))))).)))))..))))).)))))))))))))..

Structure

-g             g     uu  u   u     gua  u 
  uuccuccgugggu gggau  gu gca uacuu   gc  
  ||||||||||||| |||||  || ||| |||||   || g
  aaggagguGUCCG CCCUG  CA CGU AUgag   ug  
ga             G     UU  -   U     aug  u 

Annotation confidence Medium

Genome context

chr4: 3994560-3994640 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from gga-mir-92-2

Mature gga-miR-92-3p

• Accession: MIMAT0001109
• Description: Gallus gallus gga-miR-92-3p mature miRNA
• Sequence: 51 - UAUUGCACUUGUCCCGGCCUG - 71
• Evidence: experimental ; cloned [2], Illumina [3]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196