Stem-loop gga-mir-92-2

Accession

MI0029335

Description

Gallus gallus gga-mir-92-2 precursor miRNA

Literature search

17 open access papers mention gga-mir-92-2
(38 sentences)

Sequence

16084066 reads, 10079.0 reads per million, 260 experiments

guuccuccguGGGUGGGGAUUUGUUGCAUUACUuguagcuguguguagagUAUUGCACUUGUCCCGGCCUGUggaggaaag
.(((((((((((((.(((((..((.(((.(((((...((...))...))))).)))))..))))).)))))))))))))..

Structure

-g             G     UU  U   U     gua  u 
  uuccuccguGGGU GGGAU  GU GCA UACUu   gc  
  ||||||||||||| |||||  || ||| |||||   || g
  aaggaggUGUCCG CCCUG  CA CGU AUgag   ug  
ga             G     UU  -   U     aug  u 

Annotation confidence High

Genome context

4: 3923873-3923953 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from gga-mir-92-2

Mature gga-miR-92-2-5p

• Accession: MIMAT0061080
• Description: Gallus gallus gga-miR-92-2-5p mature miRNA
• Sequence: 11 - GGGUGGGGAUUUGUUGCAUUACU - 33
• Evidence: experimental ; cloned [2], Illumina [3]

Mature gga-miR-92-3p

• Accession: MIMAT0001109
• Description: Gallus gallus gga-miR-92-3p mature miRNA
• Sequence: 51 - UAUUGCACUUGUCCCGGCCUGU - 72
• Evidence: experimental ; cloned [2], Illumina [3]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196