miRBase entry: aca-let-7a-3

Stem-loop aca-let-7a-3

Accession

MI0029347

Description

Anolis carolinensis aca-let-7a-3 precursor miRNA

Literature search

1 open access papers mention aca-let-7a-3
(1 sentences)

Sequence

gggUGAGGUAGUAGGUUGUAUAGUUuuaggguucugcccugccugucacauaaCUAUACAAUCUACUGUCUUUCcu
(((.(((((((((((((((((((((.((((((...))))))..........))))))))))))))))))))).)))

Structure

   U                     ---------u      u 
ggg GAGGUAGUAGGUUGUAUAGUU          uagggu  
||| |||||||||||||||||||||          |||||| c
ucC UUCUGUCAUCUAACAUAUCaa          gucccg  
   U                     uacacugucc      u

Annotation confidence Not enough data

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Genome context

chr5: 83533339-83533414 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from aca-let-7a-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature aca-let-7a-5p

Accession	MIMAT0021692
Description	Anolis carolinensis aca-let-7a-5p mature miRNA
Sequence	4 - UGAGGUAGUAGGUUGUAUAGUU - 25
Evidence	experimental Illumina [1]

Mature aca-let-7a-3-3p

Accession	MIMAT0037558
Description	Anolis carolinensis aca-let-7a-3-3p mature miRNA
Sequence	54 - CUAUACAAUCUACUGUCUUUC - 74
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196