Stem-loop aca-let-7a-3

Accession

MI0029347

Description

Anolis carolinensis aca-let-7a-3 precursor miRNA

Literature search

1 open access papers mention aca-let-7a-3
(1 sentences)

Sequence

gggUGAGGUAGUAGGUUGUAUAGUUuuaggguucugcccugccugucacauaaCUAUACAAUCUACUGUCUUUCcu
(((.(((((((((((((((((((((.((((((...))))))..........))))))))))))))))))))).)))

Structure

   U                     ---------u      u 
ggg GAGGUAGUAGGUUGUAUAGUU          uagggu  
||| |||||||||||||||||||||          |||||| c
ucC UUCUGUCAUCUAACAUAUCaa          gucccg  
   U                     uacacugucc      u 

Annotation confidence Not enough data

Genome context

chr5: 83533339-83533414 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from aca-let-7a-3

Mature aca-let-7a-5p

• Accession: MIMAT0021692
• Description: Anolis carolinensis aca-let-7a-5p mature miRNA
• Sequence: 4 - UGAGGUAGUAGGUUGUAUAGUU - 25
• Evidence: experimental ; Illumina [1]

Mature aca-let-7a-3-3p

• Accession: MIMAT0037558
• Description: Anolis carolinensis aca-let-7a-3-3p mature miRNA
• Sequence: 54 - CUAUACAAUCUACUGUCUUUC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196