Stem-loop aca-mir-26-3

Accession

MI0029350

Description

Anolis carolinensis aca-mir-26-3 precursor miRNA

Literature search

1 open access papers mention aca-mir-26-3
(2 sentences)

Sequence

87447 reads, 29831.0 reads per million, 2 experiments

aaggcuucagccuggUUCAAGUAAUCCAGGAUAGGCUguuaccaggcagUACGGCCUAUUCUUGAUUACUUGuuucaggaggcggcc
..((((.(..(((((..(((((((((.((((((((((((.((......)))))))))))))).)))))))))..)))))..).))))

Structure

aa    u ag     UU         C            u  ca 
  ggcu c  ccugg  CAAGUAAUC AGGAUAGGCUgu ac  g
  |||| |  |||||  ||||||||| |||||||||||| ||   
  ccgg g  ggacu  GUUCAUUAG UCUUAUCCGGCA Ug  g
--    c ga     uu         U            -  ac 

Annotation confidence Not enough data

Genome context

chr2: 67040500-67040586 [-]

Mature aca-miR-26-3-5p

• Accession: MIMAT0037561
• Description: Anolis carolinensis aca-miR-26-3-5p mature miRNA
• Sequence: 16 - UUCAAGUAAUCCAGGAUAGGCU - 37
• Evidence: experimental ; Illumina [1]

Mature aca-miR-26-3p

• Accession: MIMAT0037562
• Description: Anolis carolinensis aca-miR-26-3p mature miRNA
• Sequence: 50 - UACGGCCUAUUCUUGAUUACUUG - 72
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196