Stem-loop aca-mir-133a-3

Accession

MI0029353

Description

Anolis carolinensis aca-mir-133a-3 precursor miRNA

Literature search

2 open access papers mention aca-mir-133a-3
(8 sentences)

Sequence

1759 reads, 621.0 reads per million, 2 experiments

ugugucccuagggcugguaaaaaggaaccagaucgacuggcaacuggaUUUGGUCCCCUUCAACCAGCUGUgguggc
...(((.(((.(((((((..((.((.((((((((.(........).)))))))).)).))..))))))).))).)))

Structure

ugu   c   g       aa  a  a        g cug 
   guc cua ggcuggu  aa gg accagauc a   g
   ||| ||| |||||||  || || |||||||| |    
   cgg ggU UCGACCA  UU CC UGGUUUag u   c
---   u   G       AC  C  C        g caa 

Annotation confidence Not enough data

Genome context

GL343308.1: 91297-91373 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from aca-mir-133a-3

Mature aca-miR-133a-3p

• Accession: MIMAT0021749
• Description: Anolis carolinensis aca-miR-133a-3p mature miRNA
• Sequence: 49 - UUUGGUCCCCUUCAACCAGCUGU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196