miRBase entry: aca-mir-133a-3

Stem-loop aca-mir-133a-3

Accession

MI0029353

Description

Anolis carolinensis aca-mir-133a-3 precursor miRNA

Literature search

2 open access papers mention aca-mir-133a-3
(8 sentences)

Sequence

ugugucccuagggcugguaaaaaggaaccagaucgacuggcaacuggaUUUGGUCCCCUUCAACCAGCUGugguggc
...(((.(((.(((((((..((.((.((((((((.(........).)))))))).)).))..))))))).))).)))

Structure

ugu   c   g       aa  a  a        g cug 
   guc cua ggcuggu  aa gg accagauc a   g
   ||| ||| |||||||  || || |||||||| |    
   cgg ggu UCGACCA  UU CC UGGUUUag u   c
---   u   G       AC  C  C        g caa

Annotation confidence Not enough data

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Genome context

GL343308.1: 91297-91373 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from aca-mir-133a-3

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature aca-miR-133a-3p

Accession	MIMAT0037566
Description	Anolis carolinensis aca-miR-133a-3p mature miRNA
Sequence	49 - UUUGGUCCCCUUCAACCAGCUG - 70
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196