miRBase entry: aca-mir-181c

Stem-loop aca-mir-181c

Accession

MI0029355

Description

Anolis carolinensis aca-mir-181c precursor miRNA

Sequence

aaagucacaaucAACAUUCAUUCUGUCGGUGGGUugugaugcuggaggagaaccucacugaucagugaaugcaacuguggcugga
..(((((((.....((((((((..(((((((((((.(...........).)))).))))))).))))))))....)))))))...

Structure

-aa       aucAA        CU       -    g gaug 
   agucaca     CAUUCAUU  GUCGGUG GGUu u    c
   |||||||     ||||||||  ||||||| |||| |    u
   ucggugu     guaaguga  uagucac ccaa a    g
agg       -caac        -c       u    g ggag

Annotation confidence Not enough data

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Genome context

chr2: 77114294-77114378 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from aca-mir-181c

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature aca-miR-181c-5p

Accession	MIMAT0037569
Description	Anolis carolinensis aca-miR-181c-5p mature miRNA
Sequence	13 - AACAUUCAUUCUGUCGGUGGGU - 34
Evidence	experimental Illumina [1]

References

PubMed ID: 24798503
Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
"Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
"Evol Dev (2014) 16:189-196