Stem-loop aca-mir-222b

Accession

MI0029356

Description

Anolis carolinensis aca-mir-222b precursor miRNA

Sequence

ggaugccaaugggcUGCUCAGUAGUCGGUGUAGAAUCugucugaugauacccacAGCUACAUCUGAUUACUGGGUUUCcuguggcaucag
.(((((((..(((..((((((((((((((((((....((((....)))).......))))).))))))))))))).)))..)))))))..

Structure

-g       au   cU             -     ---AAUC    u 
  gaugcca  ggg  GCUCAGUAGUCGG UGUAG       uguc g
  |||||||  |||  ||||||||||||| |||||       ||||  
  cuacggu  cCU  UGGGUCAUUAGUC ACAUC       auag a
ga       gu   -U             U     GAcaccc    u 

Annotation confidence Not enough data

Genome context

GL343528.1: 405265-405354 [+]

Mature aca-miR-222b-5p

• Accession: MIMAT0037570
• Description: Anolis carolinensis aca-miR-222b-5p mature miRNA
• Sequence: 15 - UGCUCAGUAGUCGGUGUAGAAUC - 37
• Evidence: experimental ; Illumina [1]

Mature aca-miR-222b-3p

• Accession: MIMAT0037571
• Description: Anolis carolinensis aca-miR-222b-3p mature miRNA
• Sequence: 55 - AGCUACAUCUGAUUACUGGGUUUC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196