Stem-loop aca-mir-1641

Accession

MI0029359

Description

Anolis carolinensis aca-mir-1641 precursor miRNA

Sequence

cagggcuuuuccUGGGAUUAAUGACAGUCUGGGGgucaucaucuccucccaguuaguuauuaauccucaggaaacacucagugccuu
..(((..((((((((((((((((((...(((((((..........)))))))...))))))))))).)))))))..)))........

Structure

------ca   cu       -           AGU       ucau 
        ggg  uuuccUG GGAUUAAUGAC   CUGGGGg    c
        |||  ||||||| |||||||||||   |||||||     
        cuc  aaaggac ccuaauuauug   gacccuc    a
uuccguga   ac       u           auu       cucu 

Annotation confidence Not enough data

Genome context

chr1: 133663058-133663144 [-]

Mature aca-miR-1641-5p

• Accession: MIMAT0037575
• Description: Anolis carolinensis aca-miR-1641-5p mature miRNA
• Sequence: 13 - UGGGAUUAAUGACAGUCUGGGG - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196