Stem-loop aca-mir-9574

Accession

MI0029363

Description

Anolis carolinensis aca-mir-9574 precursor miRNA

Sequence

uguuuccccagccuucUUUCAUCUCUGAAAUGCAUAUGuuuuagcaccaUUUGUAUUUCAGAGAUGGAGGGccgaagaaacgcau
.(((((..(.((((((...(((((((((((((((.(((.........))).))))))))))))))))))))).)..)))))....

Structure

---u     cc a      UUU               U   uuu 
    guuuc  c gccuuc   CAUCUCUGAAAUGCA AUG   u
    |||||  | ||||||   ||||||||||||||| |||   a
    caaag  g cGGGAG   GUAGAGACUUUAUGU Uac   g
uacg     aa c      ---               U   cac 

Annotation confidence Not enough data

Genome context

chr2: 141270217-141270301 [+]

Mature aca-miR-9574-5p

• Accession: MIMAT0037582
• Description: Anolis carolinensis aca-miR-9574-5p mature miRNA
• Sequence: 17 - UUUCAUCUCUGAAAUGCAUAUG - 38
• Evidence: experimental ; Illumina [1]

Mature aca-miR-9574-3p

• Accession: MIMAT0037583
• Description: Anolis carolinensis aca-miR-9574-3p mature miRNA
• Sequence: 50 - UUUGUAUUUCAGAGAUGGAGGG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196