Accession
MI0029376
Description
Chrysemys picta
cpi-let-7c-1 precursor miRNA
Sequence
2217160
reads,
24592.0
reads per million, 12 experiments
gugugcauccggguUGAGGUAGUAGGUUGUAUGGUUUagaguuacacccugggaguuaaCUGUACAACCUUCUAGCUUUCCUuggagcacacuuggg
((((((.((((((..(((.(((.(((((((((((((..((.(..((...))..).))))))))))))))).))).)))..)))))))))))).....
((((((.((((((..(((.(((.(((((((((((((..((.(..((...))..).))))))))))))))).))).)))..)))))))))))).....
Structure
----- a uU G U Ua g ua c
gugugc uccggg GAG UAG AGGUUGUAUGGUU ga u ca
|||||| |||||| ||| ||| ||||||||||||| || | || c
cacacg agguUC UUC AUC UCCAACAUGUCaa uu a gu
ggguu - CU G U -- g gg c
Annotation confidence
High
Do you think this miRNA is real?
Genome context
KK088228.1: 9003448-9003544 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cpi-let-7c-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cpi-let-7c-5p
| Accession | MIMAT0037599 |
| Description | Chrysemys picta cpi-let-7c-5p mature miRNA |
| Sequence | 15 - UGAGGUAGUAGGUUGUAUGGUUU - 37 |
| Evidence |
experimental
Illumina [1] |
Mature cpi-let-7c-3p
| Accession | MIMAT0037600 |
| Description | Chrysemys picta cpi-let-7c-3p mature miRNA |
| Sequence | 60 - CUGUACAACCUUCUAGCUUUCCU - 82 |
| Evidence |
experimental
Illumina [1] |
References
|
