Accession
MI0029378
Description
Chrysemys picta
cpi-let-7d precursor miRNA
Sequence
130316
reads,
1423.0
reads per million, 12 experiments
uaggaAGAGGUAGUAGGUUGCAUAGUUUuagggcagagauuuugcucacaaggaguuaaCUAUACAACCUGCUGCCUUUCUUagggcu
(((((.((((((((((((((.((((((...(((((((...)))))))..........)))))).))))))))))))))))))).....
(((((.((((((((((((((.((((((...(((((((...)))))))..........)))))).))))))))))))))))))).....
Structure
----- A C -------Uua g
uagga GAGGUAGUAGGUUG AUAGUU gggcaga
||||| |||||||||||||| |||||| ||||||| a
aUUCU UUCCGUCGUCCAAC UAUCaa cucguuu
ucggg - A uugaggaaca u
Annotation confidence
High
Do you think this miRNA is real?
Genome context
KK088242.1: 1331717-1331804 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from cpi-let-7d
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cpi-let-7d-5p
| Accession | MIMAT0037602 |
| Description | Chrysemys picta cpi-let-7d-5p mature miRNA |
| Sequence | 6 - AGAGGUAGUAGGUUGCAUAGUUU - 28 |
| Evidence |
experimental
Illumina [1] |
Mature cpi-let-7d-3p
| Accession | MIMAT0037603 |
| Description | Chrysemys picta cpi-let-7d-3p mature miRNA |
| Sequence | 60 - CUAUACAACCUGCUGCCUUUCUU - 82 |
| Evidence |
experimental
Illumina [1] |
References
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