Stem-loop cpi-mir-10b

Accession

MI0029396

Description

Chrysemys picta cpi-mir-10b precursor miRNA

Sequence

uauuacguugucuauauaUACCCUGUAGAACCGAAUUUGUgugguauucacauagucacAGAUUCGAUUCUAGGGGAAUauauggucgaugcaaaaacuu
.....(((((.((((((((.((((.(((((.((((((((((.(.(((....))).))))))))))).))))))))).)))))))).))))).........

Structure

----uauua     u        A    G     C          u g   u 
         cguug cuauauaU CCCU UAGAA CGAAUUUGUg g uau c
         ||||| |||||||| |||| ||||| |||||||||| | |||  
         guagc gguauaUA GGGG AUCUU GCUUAGAcac u aua a
uucaaaaac     u        A    -     A          - g   c 

Annotation confidence Not enough data

Genome context

KK088176.1: 6311506-6311605 [-]

Mature cpi-miR-10b-5p

• Accession: MIMAT0037627
• Description: Chrysemys picta cpi-miR-10b-5p mature miRNA
• Sequence: 19 - UACCCUGUAGAACCGAAUUUGU - 40
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-10b-3p

• Accession: MIMAT0037628
• Description: Chrysemys picta cpi-miR-10b-3p mature miRNA
• Sequence: 60 - AGAUUCGAUUCUAGGGGAAU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196