Accession
MI0029407
Description
Chrysemys picta
cpi-mir-20a precursor miRNA
Sequence
17681
reads,
185.0
reads per million, 12 experiments
gacagcuccuguaguacUAAAGUGCUUAUAGUGCAGGUAGUGuucaguaaucuACUGCAUUAUGAGCACUUAAAGUacugcuagcuguagaa
.((((((...((((((((.(((((((((((((((((.(((...........))))))))))))))))))))..)))))))).))))))....
.((((((...((((((((.(((((((((((((((((.(((...........))))))))))))))))))))..)))))))).))))))....
Structure
---g ccu -A G UGuu
acagcu guaguacU AAGUGCUUAUAGUGCAG UAG c
|||||| |||||||| ||||||||||||||||| ||| a
ugucga cgucaUGA UUCACGAGUAUUACGUC Auc g
aaga --u AA - uaau
Annotation confidence
High
Do you think this miRNA is real?
Genome context
KK083096.1: 1396807-1396898 [-]
Clustered miRNAs
5 other miRNAs are < 10 kb from cpi-mir-20a
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cpi-miR-20a-5p
| Accession | MIMAT0037647 |
| Description | Chrysemys picta cpi-miR-20a-5p mature miRNA |
| Sequence | 18 - UAAAGUGCUUAUAGUGCAGGUAGUG - 42 |
| Evidence |
experimental
Illumina [1] |
Mature cpi-miR-20a-3p
| Accession | MIMAT0037648 |
| Description | Chrysemys picta cpi-miR-20a-3p mature miRNA |
| Sequence | 54 - ACUGCAUUAUGAGCACUUAAAGU - 76 |
| Evidence |
experimental
Illumina [1] |
References
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