Stem-loop cpi-mir-26-1

Accession

MI0029415

Description

Chrysemys picta cpi-mir-26-1 precursor miRNA

Sequence

agguugugaccuggUUCAAGUAAUCCAGGAUAGGCUgugugcaaucuaauuggCCUAUUCUUGAUUACUUGCACUgggaggcaaccacga
.((((((..((((((.(((((((((.((((((((((..((........)).)))))))))).))))))))).))))))..))))))....

Structure

---a      ga      U         C          gu  gca 
    gguugu  ccuggU CAAGUAAUC AGGAUAGGCU  gu   a
    ||||||  |||||| ||||||||| ||||||||||  ||    
    ccaacg  gggUCA GUUCAUUAG UCUUAUCCgg  ua   u
agca      ga      C         U          -u  auc 

Annotation confidence Not enough data

Genome context

KK088209.1: 29205572-29205661 [-]

Mature cpi-miR-26-5p

• Accession: MIMAT0037660
• Description: Chrysemys picta cpi-miR-26-5p mature miRNA
• Sequence: 15 - UUCAAGUAAUCCAGGAUAGGCU - 36
• Evidence: experimental ; Illumina [1]

Mature cpi-miR-26-3p

• Accession: MIMAT0037661
• Description: Chrysemys picta cpi-miR-26-3p mature miRNA
• Sequence: 54 - CCUAUUCUUGAUUACUUGCACU - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196