Accession
MI0029426
Description
Chrysemys picta
cpi-mir-30c-1 precursor miRNA
Sequence
476902
reads,
4989.0
reads per million, 12 experiments
gccaugcuguagcaugUGUAAACAUCCUACACUCUCAGCUGuggacucaagguagCUGGGAGAGGGUUGUUUACUCCUucugccauggacugaa
.(((((..((((...(.(((((((.(((...((((((((((((....))...)))))))))).))).))))))).)...)))))))))......
.(((((..((((...(.(((((((.(((...((((((((((((....))...)))))))))).))).))))))).)...)))))))))......
Structure
-----g cu cau U U ACA --- g
ccaug guag g GUAAACA CCU CUCUCAGCUG ug a
||||| |||| | ||||||| ||| |||||||||| ||
gguac cguc C CAUUUGU GGG GAGGGUCgau ac c
aaguca -- uUC U U --A gga u
Annotation confidence
High
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Genome context
chr19: 6120342-6120435 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cpi-mir-30c-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cpi-miR-30c-5p
| Accession | MIMAT0037678 |
| Description | Chrysemys picta cpi-miR-30c-5p mature miRNA |
| Sequence | 17 - UGUAAACAUCCUACACUCUCAGCUG - 41 |
| Evidence |
experimental
Illumina [1] |
Mature cpi-miR-30c-3p
| Accession | MIMAT0037679 |
| Description | Chrysemys picta cpi-miR-30c-3p mature miRNA |
| Sequence | 56 - CUGGGAGAGGGUUGUUUACUCCU - 78 |
| Evidence |
experimental
Illumina [1] |
References
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