Accession
MI0029436
Description
Chrysemys picta
cpi-mir-34c precursor miRNA
Sequence
37490
reads,
421.0
reads per million, 12 experiments
acauuagccuaguuaccAGGCAGUGUAGUUAGCUGAUUGCUaaagguacAAUCACUAACCACACAGCCAGGUaaaaagguauguaa
((((..((((..(((((.(((.((((.(((((.((((((.........))))))))))).)))).))).)))))..))))))))..
((((..((((..(((((.(((.((((.(((((.((((((.........))))))))))).)))).))).)))))..))))))))..
Structure
-- ua ag A A A C CUa acau gccu uuacc GGC GUGU GUUAG UGAUUG a |||| |||| ||||| ||| |||| ||||| |||||| a ugua ugga aaUGG CCG CACA CAAUC ACUAAc g aa -- aa A A C - aug
Annotation confidence
High
Do you think this miRNA is real?
Genome context
KK083019.1: 1772337-1772422 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cpi-mir-34c
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cpi-miR-34c-5p
| Accession | MIMAT0037696 |
| Description | Chrysemys picta cpi-miR-34c-5p mature miRNA |
| Sequence | 18 - AGGCAGUGUAGUUAGCUGAUUGCU - 41 |
| Evidence |
experimental
Illumina [1] |
Mature cpi-miR-34c-3p
| Accession | MIMAT0037697 |
| Description | Chrysemys picta cpi-miR-34c-3p mature miRNA |
| Sequence | 50 - AAUCACUAACCACACAGCCAGGU - 72 |
| Evidence |
experimental
Illumina [1] |
References
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