Accession
MI0029470
Description
Chrysemys picta
cpi-mir-130d precursor miRNA
Sequence
82580
reads,
901.0
reads per million, 12 experiments
aguggugucuguccaguGCCCUUUUUAUGUUGUACUACUagugaucauacacaaaaagCAGUGCAAUGUUAAAAGGGCauuggccagugauacuguc
...((((((((.(((((((((((((.((((((((((.((.(((......)))....)).)))))))))).))))))))))))).))..))))))...
...((((((((.(((((((((((((.((((((((((.((.(((......)))....)).)))))))))).))))))))))))).))..))))))...
Structure
agu -- u U A ---a au gguguc ug ccaguGCCCUUUU AUGUUGUACU CU gug c |||||| || ||||||||||||| |||||||||| || ||| ucauag ac gguuaCGGGAAAA UGUAACGUGA ga cac a cug ug c U C aaaa au
Annotation confidence
High
Do you think this miRNA is real?
Genome context
KK088184.1: 246998-247094 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cpi-mir-130d
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cpi-miR-130d-5p
| Accession | MIMAT0059151 |
| Description | Chrysemys picta cpi-miR-130d-5p mature miRNA |
| Sequence | 18 - GCCCUUUUUAUGUUGUACUACU - 39 |
| Evidence |
experimental
Illumina [1] |
Mature cpi-miR-130d-3p
| Accession | MIMAT0037747 |
| Description | Chrysemys picta cpi-miR-130d-3p mature miRNA |
| Sequence | 59 - CAGUGCAAUGUUAAAAGGGC - 78 |
| Evidence |
experimental
Illumina [1] |
References
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