Accession
MI0029488
Description
Chrysemys picta
cpi-mir-145 precursor miRNA
Sequence
187431
reads,
2035.0
reads per million, 12 experiments
guguccucaggGUCCAGUUUUCCCAGGAAUCCCUUaggcacuaugacggggAUUCCUGGAAAUACUGUUCUUgaggccauggcucagcagcu
(((.((((((((..((((.((.(((((((((((((((...)))....)))))))))))).)).)))).)))))))).)))((((....))))
(((.((((((((..((((.((.(((((((((((((((...)))....)))))))))))).)).)))).)))))))).)))((((....))))
Structure
------------ u UC U C ---- g
gug ccucaggG CAGU UU CCAGGAAUCCCU Uag
||| |||||||| |||| || |||||||||||| ||| c
uac ggagUUCU GUCA AA GGUCCUUAgggg auc
ucgacgacucgg c -U U A cagu a
Annotation confidence
High
Do you think this miRNA is real?
Genome context
KK088198.1: 3606854-3606945 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cpi-mir-145
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cpi-miR-145-5p
| Accession | MIMAT0037772 |
| Description | Chrysemys picta cpi-miR-145-5p mature miRNA |
| Sequence | 12 - GUCCAGUUUUCCCAGGAAUCCCUU - 35 |
| Evidence |
experimental
Illumina [1] |
Mature cpi-miR-145-3p
| Accession | MIMAT0037773 |
| Description | Chrysemys picta cpi-miR-145-3p mature miRNA |
| Sequence | 52 - AUUCCUGGAAAUACUGUUCUU - 72 |
| Evidence |
experimental
Illumina [1] |
References
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