Stem-loop cpi-mir-155a

Accession

MI0029498

Description

Chrysemys picta cpi-mir-155a precursor miRNA

Sequence

uaggcuguauguugUUAAUGCUAAUCGUGAUAGGGGuuuuuaccuaugacugacuccuacauguuagcauuaacacuguaugaugccuuu
.((((.(((((.((((((((((((.((((.((((((((.............)))))))))))))))))))))))).)))))...))))..

Structure

-u    --u     u            U    A        uuuac 
  aggc   guaug ugUUAAUGCUAA CGUG UAGGGGuu     c
  ||||   ||||| |||||||||||| |||| ||||||||     u
  uccg   uaugu acaauuacgauu guac auccucag     a
uu    uag     c            -    -        ucagu 

Annotation confidence Not enough data

Genome context

KK082968.1: 80872-80961 [-]

Mature cpi-miR-155a-5p

• Accession: MIMAT0037789
• Description: Chrysemys picta cpi-miR-155a-5p mature miRNA
• Sequence: 15 - UUAAUGCUAAUCGUGAUAGGGG - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196