Accession
MI0029507
Description
Chrysemys picta
cpi-mir-183 precursor miRNA
Sequence
71833
reads,
680.0
reads per million, 12 experiments
gcguuacuccuguucugugUAUGGCACUGGUAGAAUUCACUgugaaaacacacuaucagUGAAUUACCAUAGGGCCAUAaacagagcagagaaagaacc
..(((..(((((((((((.((((((..(((((..((((((((..(........)..)))))))))))))....)))))).))))))))).))...))).
..(((..(((((((((((.((((((..(((((..((((((((..(........)..)))))))))))))....)))))).))))))))).))...))).
Structure
gc -ac - g --AC GA ug aaa guu uc cuguucugu UAUGGC UGGUA AUUCACUg a c ||| || ||||||||| |||||| ||||| |||||||| | caa ag gacgagaca AUACCG ACCAU UAAGUgac u a -c gaa a a GGAU -- ua cac
Annotation confidence
High
Do you think this miRNA is real?
Genome context
KK083104.1: 1276366-1276464 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from cpi-mir-183
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cpi-miR-183-5p
| Accession | MIMAT0037800 |
| Description | Chrysemys picta cpi-miR-183-5p mature miRNA |
| Sequence | 20 - UAUGGCACUGGUAGAAUUCACU - 41 |
| Evidence |
experimental
Illumina [1] |
Mature cpi-miR-183-3p
| Accession | MIMAT0059156 |
| Description | Chrysemys picta cpi-miR-183-3p mature miRNA |
| Sequence | 60 - UGAAUUACCAUAGGGCCAUA - 79 |
| Evidence |
experimental
Illumina [1] |
References
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