Stem-loop cpi-mir-375

Accession

MI0029562

Description

Chrysemys picta cpi-mir-375 precursor miRNA

Sequence

agcaaccucugcacuugccuggcgucgagccccacgugcaagaccugacgugaacguUUUGUUCGUUCGGCUCGCGUUAggcagguccagccugucg
.(((....(((.((((((((((((.((((((..(((.(((((((...........))))))).)))..)))))))))))))))))).)))..)))..

Structure

-a   accu   c            u      cc   u       cuga 
  gca    cug acuugccuggcg cgagcc  acg gcaagac    c
  |||    ||| |||||||||||| ||||||  ||| |||||||    g
  ugu    gac uggacggAUUGC GCUCGG  UGC UGUUUug    u
gc   --cc   c            -      CU   U       caag 

Annotation confidence Not enough data

Genome context

KK082919.1: 1101171-1101267 [+]

Mature cpi-miR-375-3p

• Accession: MIMAT0037873
• Description: Chrysemys picta cpi-miR-375-3p mature miRNA
• Sequence: 58 - UUUGUUCGUUCGGCUCGCGUUA - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196