Stem-loop ami-let-7g

Accession

MI0029650

Description

Alligator mississippiensis ami-let-7g precursor miRNA

Sequence

gccugauuccaagcUGAGGUAGUAGUUUGUACAGUUugagggucuaugauaccacccgguacaggagauuaaCUGUACAGGCCACUGCCUUGCcugggacag
..(((.(((((.((.((((((((.((((((((((((....(((((.((.((((....))))))..))))))))))))))))).)))))))))).))))))))

Structure

gc   a     a  U        A            ugag     -a  a    a 
  cug uucca gc GAGGUAGU GUUUGUACAGUU    ggucu  ug uacc c
  ||| ||||| || |||||||| ||||||||||||    |||||  || ||||  
  gac agggu CG UUCCGUCA CGGACAUGUCaa    uuaga  ac augg c
--   -     c  -        C            ----     gg  -    c 

Annotation confidence Not enough data

Genome context

AKHW03003049.1: 483082-483183 [-]

Mature ami-let-7g-5p

• Accession: MIMAT0038014
• Description: Alligator mississippiensis ami-let-7g-5p mature miRNA
• Sequence: 15 - UGAGGUAGUAGUUUGUACAGUU - 36
• Evidence: experimental ; Illumina [1]

Mature ami-let-7g-3p

• Accession: MIMAT0038015
• Description: Alligator mississippiensis ami-let-7g-3p mature miRNA
• Sequence: 73 - CUGUACAGGCCACUGCCUUGC - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196