Stem-loop ami-mir-9-2

Accession

MI0029660

Description

Alligator mississippiensis ami-mir-9-2 precursor miRNA

Sequence

gaagcgaguuguuaUCUUUGGUUAUCUAGCUGUAUGaguguuuuggucuucaUAAAGCUAGAUAACCGAAAGUaaaaacuccuuca
((((.(((((.((((.(((((((((((((((.((((((.(.......))))))).))))))))))))))).)))).))))))))).

Structure

-    c     g    C               G      u uu 
 gaag gaguu uuaU UUUGGUUAUCUAGCU UAUGag g  u
 |||| ||||| |||| ||||||||||||||| |||||| |  u
 cuuc cucaa aaUG AAGCCAAUAGAUCGA AUacuu c  g
a    -     a    A               A      - ug 

Annotation confidence Not enough data

Genome context

AKHW03000179.1: 13620882-13620967 [-]

Mature ami-miR-9-5p

• Accession: MIMAT0038027
• Description: Alligator mississippiensis ami-miR-9-5p mature miRNA
• Sequence: 15 - UCUUUGGUUAUCUAGCUGUAUG - 36
• Evidence: experimental ; Illumina [1]

Mature ami-miR-9-3p

• Accession: MIMAT0038028
• Description: Alligator mississippiensis ami-miR-9-3p mature miRNA
• Sequence: 53 - UAAAGCUAGAUAACCGAAAGU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196