Stem-loop ami-mir-9-4

Accession

MI0029662

Description

Alligator mississippiensis ami-mir-9-4 precursor miRNA

Sequence

guggguuuuugUCUUUGGUUAUCUAGCUGUAUGaguguaugugauaucaUAAAGCUAGACAACCGAAUGUaaaaaccggcucgc
((.((((((((..(((((((.(((((((.(((((............))))).))))))).)))))))..)))))))).))....

Structure

----  g        UC       A       G     gugua 
    gu gguuuuug  UUUGGUU UCUAGCU UAUGa     u
    || ||||||||  ||||||| ||||||| |||||      
    cg ccaaaaaU  AAGCCAA AGAUCGA AUacu     g
cgcu  g        GU       C       A     auagu 

Annotation confidence Not enough data

Genome context

AKHW03005600.1: 4846-4929 [+]

Mature ami-miR-9-5p

• Accession: MIMAT0038027
• Description: Alligator mississippiensis ami-miR-9-5p mature miRNA
• Sequence: 12 - UCUUUGGUUAUCUAGCUGUAUG - 33
• Evidence: experimental ; Illumina [1]

Mature ami-miR-9-4-3p

• Accession: MIMAT0038029
• Description: Alligator mississippiensis ami-miR-9-4-3p mature miRNA
• Sequence: 50 - UAAAGCUAGACAACCGAAUGU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196