Stem-loop ami-mir-26-2

Accession

MI0029683

Description

Alligator mississippiensis ami-mir-26-2 precursor miRNA

Sequence

cauggggucacggcccggUUCAAGUAAUCCAGGAUAGGCUggugccaggcccguggCCUAUUCUCGAUUACUUGUCUcgggacguggcugcuggca
((.(.(((((((.(((((..(((((((((.((((((((((((.((...))))..)))))))))).)))))))))..))))).))))))).)))...

Structure

---  u g       g     UU         C          --  u  c 
   ca g ggucacg cccgg  CAAGUAAUC AGGAUAGGCU  gg gc  
   || | ||||||| |||||  ||||||||| ||||||||||  || || a
   gu c ucggugc gggcU  GUUCAUUAG UCUUAUCCgg  cc cg  
acg  - g       a     CU         C          ug  -  g 

Annotation confidence Not enough data

Genome context

AKHW03007029.1: 114258-114353 [-]

Mature ami-miR-26-5p

• Accession: MIMAT0038064
• Description: Alligator mississippiensis ami-miR-26-5p mature miRNA
• Sequence: 19 - UUCAAGUAAUCCAGGAUAGGCU - 40
• Evidence: experimental ; Illumina [1]

Mature ami-miR-26-2-3p

• Accession: MIMAT0038066
• Description: Alligator mississippiensis ami-miR-26-2-3p mature miRNA
• Sequence: 57 - CCUAUUCUCGAUUACUUGUCU - 77
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196