Stem-loop ami-mir-34a

Accession

MI0029700

Description

Alligator mississippiensis ami-mir-34a precursor miRNA

Sequence

ugugaguguuucuuUGGCAGUGUCUUAGCUGGUUGUUgugaacaauagacaaggaaGCAAUCAGCAAGUAUACUGCCCUagaagugcugcaca
(((((((((((((..(((((((((((.((((((((((..................))))))))))))).))))))))..))))))))).))))

Structure

    -         uU        -   A          gugaacaa 
ugug aguguuucu  GGCAGUGU CUU GCUGGUUGUU        u
|||| |||||||||  |||||||| ||| ||||||||||         
acac ucgugaaga  CCGUCAUA GAA CGACUAACGa        a
    g         UC        U   -          aggaacag 

Annotation confidence Not enough data

Genome context

AKHW03004073.1: 7835102-7835194 [+]

Mature ami-miR-34a-5p

• Accession: MIMAT0038095
• Description: Alligator mississippiensis ami-miR-34a-5p mature miRNA
• Sequence: 15 - UGGCAGUGUCUUAGCUGGUUGUU - 37
• Evidence: experimental ; Illumina [1]

Mature ami-miR-34a-3p

• Accession: MIMAT0038096
• Description: Alligator mississippiensis ami-miR-34a-3p mature miRNA
• Sequence: 57 - GCAAUCAGCAAGUAUACUGCCCU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196