Stem-loop ami-mir-101-1

Accession

MI0029711

Description

Alligator mississippiensis ami-mir-101-1 precursor miRNA

Sequence

acaggcugcccuggcUCAGUUAUCACAGUGCUGAUGCUgucuauucuaaaggUACAGUACUGUGAUAACUGAAGgauggcagccaucuuagcuu
...(((((((.....((((((((((((((((((.((((............)))))))))))))))))))))).....)))))))..........

Structure

-------aca       cuggc                  A    gucua 
          ggcugcc     UCAGUUAUCACAGUGCUG UGCU     u
          |||||||     |||||||||||||||||| ||||      
          ccgacgg     AGUCAAUAGUGUCAUGAC AUgg     u
uucgauucua       uagGA                  -    aaauc 

Annotation confidence Not enough data

Genome context

AKHW03002907.1: 12121204-12121297 [+]

Mature ami-miR-101-5p

• Accession: MIMAT0038116
• Description: Alligator mississippiensis ami-miR-101-5p mature miRNA
• Sequence: 16 - UCAGUUAUCACAGUGCUGAUGCU - 38
• Evidence: experimental ; Illumina [1]

Mature ami-miR-101-3p

• Accession: MIMAT0038117
• Description: Alligator mississippiensis ami-miR-101-3p mature miRNA
• Sequence: 53 - UACAGUACUGUGAUAACUGAAG - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196