Stem-loop ami-mir-124-4

Accession

MI0029720

Description

Alligator mississippiensis ami-mir-124-4 precursor miRNA

Sequence

uccggaccgcggccucggcucucCGUGUUCACAGCGGACCUUGAUuuaaugucacacaauUAAGGCACGCGGUGAAUGCCAagagaggggccgccc
........((((((((..((((..((((((((.(((..((((((((...........))))))))..))).))))))))..)))).))))))))..

Structure

uccggacc        gg    cC        A   GA        uaau 
        gcggccuc  cucu  GUGUUCAC GCG  CCUUGAUu    g
        ||||||||  ||||  |||||||| |||  ||||||||    u
        cgccgggg  gaga  CGUAAGUG CGC  GGAAUuaa    c
------cc        -a    AC        G   AC        caca 

Annotation confidence Not enough data

Genome context

AKHW03003146.1: 925364-925459 [-]

Mature ami-miR-124-5p

• Accession: MIMAT0038125
• Description: Alligator mississippiensis ami-miR-124-5p mature miRNA
• Sequence: 24 - CGUGUUCACAGCGGACCUUGAU - 45
• Evidence: experimental ; Illumina [1]

Mature ami-miR-124-3p

• Accession: MIMAT0038126
• Description: Alligator mississippiensis ami-miR-124-3p mature miRNA
• Sequence: 61 - UAAGGCACGCGGUGAAUGCCA - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196