Stem-loop ami-mir-125b-2

Accession

MI0029723

Description

Alligator mississippiensis ami-mir-125b-2 precursor miRNA

Sequence

ggacuuuuccuagUCCCUGAGACCCUAACUUGUGAgguuuuuuagcaacaaucACAAGUCAGGCUCUUGGGACcuaggcggaggggaaccagc
...((((.(((((((((.((((.(((.((((((((.(((.......)))..)))))))).))).)))))))).))))).))))..........

Structure

-------gga    u     -    U    C   A        -g   uu 
          cuuu ccuag UCCC GAGA CCU ACUUGUGA  guu  u
          |||| ||||| |||| |||| ||| ||||||||  |||  u
          gagg ggauc AGGG UUCU GGA UGAACAcu  caa  a
cgaccaaggg    c     C    -    C   C        aa   cg 

Annotation confidence Not enough data

Genome context

AKHW03006231.1: 37281652-37281744 [+]

Mature ami-miR-125b-5p

• Accession: MIMAT0038128
• Description: Alligator mississippiensis ami-miR-125b-5p mature miRNA
• Sequence: 14 - UCCCUGAGACCCUAACUUGUGA - 35
• Evidence: experimental ; Illumina [1]

Mature ami-miR-125b-2-3p

• Accession: MIMAT0038130
• Description: Alligator mississippiensis ami-miR-125b-2-3p mature miRNA
• Sequence: 54 - ACAAGUCAGGCUCUUGGGAC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196