Stem-loop ami-mir-130a

Accession

MI0029729

Description

Alligator mississippiensis ami-mir-130a precursor miRNA

Sequence

caggccccuguccaaggcucuuuucacauuguacuacuguaugagccccugccaagCAAUGCAAUGUAAAAAGGGCAUuggguaggugguccc
..(((((((((((((.((((((((.((((((((....(((.((.((....)))).))).)))))))).)))))))).))))))))).))))..

Structure

ca    -         g        c        cuac   a  a  c 
  ggcc ccuguccaa gcucuuuu acauugua    ugu ug gc c
  |||| ||||||||| |||||||| ||||||||    ||| || ||  
  cugg ggauggguU CGGGAAAA UGUAACGU    ACg ac cg c
cc    u         A        A        ---A   a  -  u 

Annotation confidence Not enough data

Genome context

AKHW03001868.1: 610391-610483 [+]

Mature ami-miR-130a-3p

• Accession: MIMAT0038140
• Description: Alligator mississippiensis ami-miR-130a-3p mature miRNA
• Sequence: 57 - CAAUGCAAUGUAAAAAGGGCAU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196