Stem-loop ami-mir-144

Accession

MI0029749

Description

Alligator mississippiensis ami-mir-144 precursor miRNA

Sequence

gcggggggcucugggcaGGAUAUCAUCGUAUACUGUAAGucggcuaugagacacUACAGUAUAGAUGAUGUACUAccccggccuuuccccu
..((((((((..(((.((.((((((((.(((((((((.(((........)))..))))))))))))))))).)).))).))))...)))).

Structure

gc    ---    cu   c  G        G         -A   ggc 
  gggg   ggcu  ggg aG AUAUCAUC UAUACUGUA  Guc   u
  ||||   ||||  ||| || |||||||| |||||||||  |||    
  cccc   ccgg  ccc UC UGUAGUAG AUAUGACAU  cag   a
-u    uuu    -c   A  A        -         ca   agu 

Annotation confidence Not enough data

Genome context

AKHW03003808.1: 62842-62932 [-]

Mature ami-miR-144-5p

• Accession: MIMAT0038167
• Description: Alligator mississippiensis ami-miR-144-5p mature miRNA
• Sequence: 18 - GGAUAUCAUCGUAUACUGUAAG - 39
• Evidence: experimental ; Illumina [1]

Mature ami-miR-144-3p

• Accession: MIMAT0038168
• Description: Alligator mississippiensis ami-miR-144-3p mature miRNA
• Sequence: 55 - UACAGUAUAGAUGAUGUACUA - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196