Stem-loop ami-mir-146a

Accession

MI0029751

Description

Alligator mississippiensis ami-mir-146a precursor miRNA

Sequence

auguauucuuggcuuUGAGAACUGAAUUCCAUGGGUuguaauugaaucuugaacagacccauggggcucaguucuucagcuuggauauc
..((((((..((((..(((((((((.(((((((((((..................))))))))))).))))))))).)))).)))))).

Structure

au      uu    uU         A           guaauuga 
  guauuc  ggcu  GAGAACUGA UUCCAUGGGUu        a
  ||||||  ||||  ||||||||| |||||||||||         
  uauagg  ucga  uucuugacu gggguacccag        u
-c      -u    -c         c           acaaguuc 

Annotation confidence Not enough data

Genome context

AKHW03006437.1: 11963142-11963230 [-]

Mature ami-miR-146a-5p

• Accession: MIMAT0038171
• Description: Alligator mississippiensis ami-miR-146a-5p mature miRNA
• Sequence: 16 - UGAGAACUGAAUUCCAUGGGU - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196