Stem-loop ami-mir-147

Accession

MI0029754

Description

Alligator mississippiensis ami-mir-147 precursor miRNA

Sequence

uacucuaugaaucuagUGGAAUCAUUUCUGCACAAACUcgacuauugaaaucaGUGUGCGGAAAUGCUUCUGCUacauuuuuagggucuccc
.((((((.((((.((((((((.((((((((((((...((((...))))......)))))))))))).)))))))).)))).)))))).....

Structure

----u      u    c        U            ---AAC    c 
     acucua gaau uagUGGAA CAUUUCUGCACA      Ucga  
     |||||| |||| |||||||| ||||||||||||      |||| u
     ugggau uuua aUCGUCUU GUAAAGGCGUGU      aguu  
cccuc      u    c        C            Gacuaa    a 

Annotation confidence Not enough data

Genome context

AKHW03006295.1: 16718613-16718704 [-]

Mature ami-miR-147-5p

• Accession: MIMAT0038176
• Description: Alligator mississippiensis ami-miR-147-5p mature miRNA
• Sequence: 17 - UGGAAUCAUUUCUGCACAAACU - 38
• Evidence: experimental ; Illumina [1]

Mature ami-miR-147-3p

• Accession: MIMAT0038177
• Description: Alligator mississippiensis ami-miR-147-3p mature miRNA
• Sequence: 54 - GUGUGCGGAAAUGCUUCUGCU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196