Stem-loop ami-mir-153-2

Accession

MI0029759

Description

Alligator mississippiensis ami-mir-153-2 precursor miRNA

Sequence

agcgguugccagugucauuuuugugauguugcagcuaguaauaugagcccagUUGCAUAGUCACAAAAGUGAUCauuggaaacugugacu
.((((((.(((((((((((((((((((..(((((((.((.......))..)))))))..))))))))))))).)))))).))))))....

Structure

---a      g      -             gu       -a  aa 
    gcgguu ccagug ucauuuuugugau  ugcagcu  gu  u
    |||||| |||||| |||||||||||||  |||||||  ||  a
    ugucaa gguuaC AGUGAAAACACUG  ACGUUga  cg  u
ucag      a      U             AU       cc  ag 

Annotation confidence Not enough data

Genome context

AKHW03000487.1: 19689896-19689985 [+]

Mature ami-miR-153-3p

• Accession: MIMAT0038184
• Description: Alligator mississippiensis ami-miR-153-3p mature miRNA
• Sequence: 53 - UUGCAUAGUCACAAAAGUGAUC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196