Stem-loop ami-mir-205b

Accession

MI0029792

Description

Alligator mississippiensis ami-mir-205b precursor miRNA

Sequence

uccauggcuuucuggugCCCUUCAUUCCACCGGAAUCUGUagggaucaaaaccagauuucagugaaaugaagccccucagacguggaau
((((((....(((((.(..(((((((.(((.(((((((...((........))))))))).))).)))))))..).)))))))))))..

Structure

--      gcuu     u CC       C   C       GUa  gau 
  uccaug    ucugg g  CUUCAUU CAC GGAAUCU   gg   c
  ||||||    ||||| |  ||||||| ||| |||||||   ||    
  aggugc    agacu c  gaaguaa gug cuuuaga   cc   a
ua      ----     c cc       a   a       ---  aaa 

Annotation confidence Not enough data

Genome context

AKHW03002440.1: 27055187-27055275 [+]

Mature ami-miR-205b-5p

• Accession: MIMAT0038230
• Description: Alligator mississippiensis ami-miR-205b-5p mature miRNA
• Sequence: 18 - CCCUUCAUUCCACCGGAAUCUGU - 40
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196