Stem-loop ami-mir-206

Accession

MI0029793

Description

Alligator mississippiensis ami-mir-206 precursor miRNA

Sequence

cuucucuuuugaggcaACAUGCUUCUUUAUAUCCCCAUagggauaacagugcuaUGGAAUGUAAGGAAGUGUGUGGuuucggggagaug
..(((((((.(((((.((((((((((((((((..((((((.(.......).)))))).)))))))))))))))).))))))))))))..

Structure

cu       u     a                CC      g au 
  ucucuuu gaggc ACAUGCUUCUUUAUAU  CCAUag g  a
  ||||||| ||||| ||||||||||||||||  |||||| |  a
  agagggg cuuuG UGUGUGAAGGAAUGUA  GGUauc u  c
gu       -     G                -A      g ga 

Annotation confidence Not enough data

Genome context

AKHW03003504.1: 2014183-2014271 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ami-mir-206

Mature ami-miR-206-5p

• Accession: MIMAT0038231
• Description: Alligator mississippiensis ami-miR-206-5p mature miRNA
• Sequence: 17 - ACAUGCUUCUUUAUAUCCCCAU - 38
• Evidence: experimental ; Illumina [1]

Mature ami-miR-206-3p

• Accession: MIMAT0038232
• Description: Alligator mississippiensis ami-miR-206-3p mature miRNA
• Sequence: 55 - UGGAAUGUAAGGAAGUGUGUGG - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196