Stem-loop ami-mir-208

Accession

MI0029794

Description

Alligator mississippiensis ami-mir-208 precursor miRNA

Sequence

gcugcuuccuccaacagggaagcuuuuggcuuggguuauauugucacucgcaguguAUAAGACGAGCGAAAAGCUUCUugguuggaagagagau
.....(((.((((((.(((((((((((.(((((...((((((((.....)))))))).....))))).))))))))))).)))))).)))....

Structure

gcugc   c      a           g     --ggu        c 
     uuc uccaac gggaagcuuuu gcuug     uauauugu a
     ||| |||||| ||||||||||| |||||     |||||||| c
     gag agguug uUCUUCGAAAA CGAGC     Augugacg u
-uaga   a      g           G     AGAAU        c 

Annotation confidence Not enough data

Genome context

AKHW03002411.1: 122937-123030 [-]

Mature ami-miR-208-3p

• Accession: MIMAT0038233
• Description: Alligator mississippiensis ami-miR-208-3p mature miRNA
• Sequence: 57 - AUAAGACGAGCGAAAAGCUUCU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24798503
   Toward consilience in reptile phylogeny: miRNAs support an archosaur, not lepidosaur, affinity for turtles
   "Field DJ, Gauthier JA, King BL, Pisani D, Lyson TR, Peterson KJ"
   "Evol Dev (2014) 16:189-196